At the beginning of autumn, the position of the communists worsened sharply. Production, fuel and political crises became more acute. Armed uprisings were taking place against the communists. There was an attempt on the life of Lenin himself. In order to save the regime the communists decided on a desperate measure. In each town and village they would take hostages and, in the case of the slightest manifestation of discontent among the inhabitants, these hostages would be shot. The Soviet state was saved, by mass executions. Then another problem arose. The Tcheka, released from its restraints and drunk with blood, got out of control. In Tver and Torzhok the Tchekists, together with the hostages, destroyed communist leaders who displeased them. One threat to the stability of the state had been replaced by another, far worse. Lenin, not yet completely recovered, immediately resumed day-to-day leadership. Without restricting the terror, he took a number of steps to control it. The most important of his decisions were, firstly, to give to the People's Commissariats (i.e. the ministries), the provincial and town committees the right to take part in court cases against arrested communists. A communist would be declared not guilty if two members of the Party Committee testified in his favour. Secondly, Lenin directed his attention to the annulment of the Tcheka's monopoly of secret activity. He finally accepted Trotsky's proposal and on 21 October 1918 signed a decree, creating a superior organ of Soviet military intelligence which was to be called the Registrational Directorate of the Field Staff of the Republic.

The newly created directorate did not increase or decrease the importance of the front and army intelligence services, it merely co-ordinated them. But at this time the directorate began the creation of a new network of agents which could be active in countries all over the world, including those where the front networks already had active agents.